Alternatives to athenahealth

athenahealth ranks #1 on the Top 11 The 11 Best EHR Software for Medical Practices (2026). Below: the higher-ranked alternatives we’d steer you to instead, by use case.

Verified June 15, 2026. No paid placement — see methodology.

1. #1Waystar

   9.3 / 9.4

   Best-in-class clearinghouse with a near-99% clean claim rate across 5,000-plus payers.

   Best for: Highest clean claim rate · Pricing: $$$ ($200 to $500/provider/mo est. plus per-claim fees) · www.waystar.com

2. #2R1 RCM

   9.1 / 9.4

   Full-service revenue cycle partner built for large hospitals and health systems.

   Best for: End-to-end outsourced RCM for systems · Pricing: $$$$ (percentage of net collections, custom enterprise) · www.r1rcm.com

See the full ranked list: The 11 Best EHR Software for Medical Practices (2026). Or compare any two: side-by-side.